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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887745.1_cds_XP_016442236.1_37520
CDS Infomation

[gene=LOC107767673] [db_xref=GeneID:107767673] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570] [protein_id=XP_016442236.1] [location=join(31478..32390,32473..34461,34606..34955)] [gbkey=CDS]
Sequence

ATGGGCAGAAGTTGCCATCTCCTGTTTGCTCTTGTAGTTTTCATTTTGTTTCATCACCAT
ACTTCACTGGCTACAGTTCCCAACATTAACACTGATGAAGCAGCTCTTCTTGCCTTGAAA
TCTCACATTTCTTCTCATCCTAATAACTTGTTACAAAGCAACTGGTCTTCTTCCAGCCCA
GTTTGTAGCTGGATTGGCATCACTTGCAGCTCTCGCCACCATCGAGTCACAGCTTTAGAC
ATTTCTAGCATGCAACTTCATGGTACCATTCCTCCGCATCTAGGAAACCTCTCATTTCTT
GTTTCTCTCGACATCAGTAACAACACTTTCCATGGGGAGTTGCCAGAAGAATTGGCTCAT
TTGCAGAGGTTGAAACTGATTGATGTCACAATCAATAACTTCACTGGTGCCATCCCACCA
TTTTTAAGTTTGTTATCTAATGTCCGATACATGTACCTATCGAGCAACCAGTTTTCGGGG
AAAATTCCATCTTCCCTTTCCAATGTAACAAAGCTGGAGGTGTTGACTCTAAAGGAAAAC
TTTCTCGAAGGAGTGATCCCTCGAGAACTCGGTGATCTTCGTCATATGACTTTCATAGAC
CTGCAATTCAACCGGCTCACTGGCTCTATACCGCCATCAATCTATAACATTACATCAATG
CAAAAGATTGGTCTCACCTACAACAATCTTACTGGCAAGTTTCCAACAACGATATGTGAC
CACCTTCCAAACTTGGAAAAGTTTGCCATCTCGTACAACTATCTAGATGGCATTATTCCA
CCAAACTTAGAAAAATGCAGAAAGCTTCAAATGTTGTCATTGTCTGGCAATGATTTCACT
GGAACTGTGCCAAAAGAGATAGGCAACTTAACAGTTCTTACAGAATTATATCTTGGAGAC
ATGCATTTGGAAGGAGAGATACCAGTGGAGCTAGGAAATCTTAAGAAACTACAGTTGCTG
GGATTATTCGGGAATGAATTTATTGGTTCCATCCCTACAAGCATTTTCAACATGTCAGCA
ATGCAGTACCTATCATTTGATGGAAACGGGCTTTTAGGTACTCTACCTTCAGATTTAGGC
CATAGAATGCCCAGCCTTGTAGAATTCAATTGTGCGACGAATAATCTGAGTGGTTTTATT
CCTGCTTCTATCTCAAATTCTTCAAGACTCAGAAAACTTGATCTCAGTGCCAACAGTTTC
ACAGGTCCAATTCTTAAATCACTTGGTAACTTAGAACATCTTGAGTTTTTGAACTTGCAG
TATAATAATTTTTATAGCGATTCAACATTGAGCTTCTTGGCATCGTTGACAAACTGTAGG
AAACTAAGAGTAATAGGTTTATCTGAGAATCCCCTGCATGGGTTTTTTCCTACATCTGTT
GGAAATTTCTCCGACTCTCTGCACATTTTTGAAAGCTATGCTTGTAAACTAAAGGGAAGT
ATTCCTGAAGAAATTGGTAATCTTACTGGAGTCACAAGGATGAATATGCTTAACAATGAG
TTGACTGGACATATTCCAAAAACTATCCAACGCATGTTGAATCTACAACAACTTTACCTA
CAAAGAAACAAGATAGAAGGAACCATACCAGATGTTATTTGCACTTTAAAGAATCTCGGT
GCATTAGACTTGACGGAAAATCAGCTTTCTGGTTCAGTGCCTCCATGCTTAGGGAACATC
ACCAGTTTGAGGAATCTTTATCTAGCTTATAACAGGCTGAATTCAACATTACCTGCAAGT
TTAGGAAGCCTTCAAGATCTCGTAGAATTCAACGTTACATCCAATTTATTAAGTGGGAAA
ATTCCTCTGGAGTTTGGAAATATAAAGGCAGCAACACTCATTGATCTATCAAAAAATAAT
TTTTCTGGTGAGATCCCTAACACTCTAGTGGGTCTGGATAGATTGATCAAACTTTCTCTA
GCACATAACAGATTAGATGGGCCTATTCCAAATTCATTTGGAAGAATGTTGGCCTTGGAA
TTCTTGGACTTGTGCTATAACAATCTTAGTGGTGAAATTCCAAAGTTATTAGAAGCTCTT
GTGTATCTCAAGTACCTGAACTTCTCGTTCAATAAACTTAGTGGAGAAATACCCAGTGGT
GGTCCTTTCGCAAATGCCACAAGTCAATCTTTCTTGGCCAATGATGCACTTTGCGGTGAC
TCTAAATTTCACGTGCCACCATGTGTCACCAAATCTCCCAAGAGGAAAAAGAAAATTTTG
GTTTTGTCTGTTGTTTTGGGAGTGGGTCTAGTATCTATTGCATTAGCCCTCTTTTATGTA
TTTTTGAGGTTGCGAAAGATGAAGAAGAATGCAAGTCTAGCAGATTCGCCTCTGGTGAAT
TTTAAAGGACATGAAAGAATTTCCTATTATGAACTTGAACAAGCAACCGAAGGATTCGAT
GAAAGCAACTTGCTTGGTAATGGGAGTTTCAGCATGGTCTACAAAGGGACACTAAAGGAT
GGTACTCTTTTGGCAGCAAAGGTATTCAAAGTGCAATTGGAGGGTGCATTCAAAAGTTTT
GACACAGAATGTGAGATGCTTCGGAACCTTCGCCACAGAAATCTGGCCAAAGTCATCACC
AGCTGCTCCAACCTTGATTACAAAGCCCTAATTTTGGAATACATGCCCAATGGGACACTT
GATAAATGGTTATACTCTCACAACTTATTCTTGGACTTATTACAGAGATTGAATGTAATG
ATAGACGTGGCTGCAGCATTAGACTATCTCCACAATGGCTATTCAACACCTGTGGTGCAT
TGTGACTTGAAGCCAAGCAATGTCTTGCTAGATCAAGACATGATTGGCCATGTCAGTGAT
TTTGGCATTGCCAAATTGCTAGGTGCAGAGGAGACTTTTGTCCAAACAAGGACTATTGCA
ACCATTGGATACATTGCTCCGGAGTATGGACAAGATGGAATAGTATCCACGAGCTGCGAT
GTTTATAGTTTTGGCATTATGATGATGGAGACGCTTACAAGAATGAGACCAAGTGATGAA
GCATTTACCGGAGACTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAAGTGAAATT
CATAAGGTGGTAGATGCTAATTTGGTACAGGCAGGGAATGAAAAAACCGACACAAAGATG
CAGTGTATGGTATCTATCATGGAATTAGCCTTGACTTGCACCTTAGTGAAACATGATGCA
AGAATTAGCATGGAAGATGCTCTTTCAACACTTAGAAAAATAAGGCTTCAATTTGTCAGT
AATCGTCACTAG

Peptide Sequence

PEP ID

XP_016442236.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Nicotiana tabacum]
Sequence

MGRSCHLLFALVVFILFHHHTSLATVPNINTDEAALLALKSHISSHPNNLLQSNWSSSSP
VCSWIGITCSSRHHRVTALDISSMQLHGTIPPHLGNLSFLVSLDISNNTFHGELPEELAH
LQRLKLIDVTINNFTGAIPPFLSLLSNVRYMYLSSNQFSGKIPSSLSNVTKLEVLTLKEN
FLEGVIPRELGDLRHMTFIDLQFNRLTGSIPPSIYNITSMQKIGLTYNNLTGKFPTTICD
HLPNLEKFAISYNYLDGIIPPNLEKCRKLQMLSLSGNDFTGTVPKEIGNLTVLTELYLGD
MHLEGEIPVELGNLKKLQLLGLFGNEFIGSIPTSIFNMSAMQYLSFDGNGLLGTLPSDLG
HRMPSLVEFNCATNNLSGFIPASISNSSRLRKLDLSANSFTGPILKSLGNLEHLEFLNLQ
YNNFYSDSTLSFLASLTNCRKLRVIGLSENPLHGFFPTSVGNFSDSLHIFESYACKLKGS
IPEEIGNLTGVTRMNMLNNELTGHIPKTIQRMLNLQQLYLQRNKIEGTIPDVICTLKNLG
ALDLTENQLSGSVPPCLGNITSLRNLYLAYNRLNSTLPASLGSLQDLVEFNVTSNLLSGK
IPLEFGNIKAATLIDLSKNNFSGEIPNTLVGLDRLIKLSLAHNRLDGPIPNSFGRMLALE
FLDLCYNNLSGEIPKLLEALVYLKYLNFSFNKLSGEIPSGGPFANATSQSFLANDALCGD
SKFHVPPCVTKSPKRKKKILVLSVVLGVGLVSIALALFYVFLRLRKMKKNASLADSPLVN
FKGHERISYYELEQATEGFDESNLLGNGSFSMVYKGTLKDGTLLAAKVFKVQLEGAFKSF
DTECEMLRNLRHRNLAKVITSCSNLDYKALILEYMPNGTLDKWLYSHNLFLDLLQRLNVM
IDVAAALDYLHNGYSTPVVHCDLKPSNVLLDQDMIGHVSDFGIAKLLGAEETFVQTRTIA
TIGYIAPEYGQDGIVSTSCDVYSFGIMMMETLTRMRPSDEAFTGDLSIRRWVSDSFPSEI
HKVVDANLVQAGNEKTDTKMQCMVSIMELALTCTLVKHDARISMEDALSTLRKIRLQFVS
NRH

Transcript Sequence

Gene sequence data has not been registered.